PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_003426-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family bHLH
Protein Properties Length: 397aa    MW: 44989.6 Da    PI: 4.6298
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_003426-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH21.83.4e-07214254853
                    HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS
            HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53 
                     Er+RR+r+ + +  Lr+l+P+      +K++K ++L  A  Y+k 
  NNU_003426-RA 214 SERNRRKRLSQQLLALRSLVPNI-----TKMDKRSVLVDALSYLKG 254
                    6*********************7.....6**************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.392206255IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.62E-12211274IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.3E-7212261IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.68E-6213253No hitNo description
Gene3DG3DSA:4.10.280.102.2E-9213268IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.4E-5214254IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    Send to blast
MKEVGDFSFQ EENQPTIETT PNPTTRYVDI ISSWLDQDDT YNPSSSFPQE LQDLQMLDDP  60
LFQFITSDLD SNLFSLQPPR PHTHESLLDF PSFDPGRPST ESVQISVDTT LITHNHLEVD  120
VRDAFVDDGN YLSLLIAPEE SQDSIDDHVF QSIMDSTTPT ALDSVEVDTP QPINTNAVDH  180
ATATEPQRYV EEDDEEATDD DPKPSVPSCK NLVSERNRRK RLSQQLLALR SLVPNITKMD  240
KRSVLVDALS YLKGIHEETA QLQKELKQQQ PPSLINLPET WPDNPIPNPR NRRGSASNIT  300
SRPKTKIIEM ETEKMEDRRY VVKITCKGST GVGGEILRVV ESLGFEITYT ALERIKPQLL  360
LTTVFVRVRK PMKMTEKKLK NYIASTALKL GLTMQKH
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010249625.10.0PREDICTED: transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR-like
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.27e-12bHLH family protein